Other Sciences

Other Sciences Projects

Differential Expression in Bulk RNA-seq with AnnData

Conduct differential gene expression analysis on bulk RNA-seq (TCGA) data using AnnData and DESeq2

Run notebook Open app

panel holoviews hvplot bokeh pydeseq2 anndata scanpy

Modified: 2025-09-27

Boids

Boids models of swarm intelligence using HoloViews

Run notebook

holoviews bokeh

Modified: 2023-10-30

Carbon Flux

Analysis of NASA Goddard/University of Alabama carbon monitoring project NEE Data Fusion

hvplot panel datashader geoviews scikit-learn dask bokeh

Modified: 2024-11-14

Gene Profiling of Cellular Subpopulations

Explore single-cell populations by linking cluster visualization with marker gene expression analysis

Run notebook Open app

panel holoviews bokeh datashader anndata scanpy

Modified: 2025-09-17

Genetic Algorithm

Interactive dashboard for Genetic Algorithm

holoviews panel bokeh

Modified: 2024-04-11

Gull Tracking

Visualizing GPS tracking for herring gulls in Belgium

Run notebook

datashader hvplot bokeh

Modified: 2024-05-24

Penguin Crossfilter

Palmer Penguin Cross-Filtering

Open app

panel holoviews hvplot bokeh

Modified: 2023-11-02

Sri Model

Agent based modelling in epidemiology using HoloViews

Run notebook

holoviews bokeh matplotlib param networkx

Modified: 2023-11-03